If the Microsoft Monitoring Agent has the APM feature enabled it can cause the app pool to crash from SLM version 9.31 onwards, this is due to an upgrade to the log4net tool and a bug in the APM feature with Microsoft.
Workaround:
Rename the APM folder:
Or the System Center 2016 Operations Manager agent can be reinstalled with the NOAPM=1 switch in msiexec.exe setup command line, and the APM feature will be excluded from setup.
To identify this as the root cause check the Windows Event Application Log for the following error:
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